PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_013913-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 453aa    MW: 48869.4 Da    PI: 5.0072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_013913-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.32.4e-07364406754
                    HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++ r RR+ri +++  L++l+P        K++ a++L +A +Y+k L
  NNU_013913-RA 364 MAARHRRERISERIRVLQRLVPGG-----SKMDTATMLDEAANYLKFL 406
                    56799*****************95.....5****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.748357406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-11362415IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-13362416IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.9E-13363412IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-4365406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.88E-4379411No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MDCLGWDDPP LWSNEQHEIG EGSMASNANG GILGGKVDLY EGVLFDPNME LRRTRVYDTS  60
SDFEGVSKMV QQLAPVLDSI NAVRLAPDTV LASSGTGSTW TEALTAELGS SNVVSSSYGL  120
NPLNDIMADF GVVDRLRVVS SSVGAGRGGV SGTAGSLESL DCLLSATNSS TDTSMEDDGI  180
SVIFSDCKNL WNFNCGGAVS SGESENNGSN GSNKEMGCRV NELDEAVSQG SSNPCVNHAK  240
SSDARPDSSK RSKDEQELNV GPNNHYFNLL QSDSSTTEGG FRLISENPPK SKKPRLEKQR  300
SSNINFQQPN SSSSSAVEPD TEAIAQMKEM IYRAAAFRPV NLGLEVVEKP KRKNVRISSD  360
PQTMAARHRR ERISERIRVL QRLVPGGSKM DTATMLDEAA NYLKFLRSQV KALEALGHKV  420
PDAVNCTSTN LPFCSSPLNH PFPMQTFFSL PKP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267082.10.0PREDICTED: transcription factor bHLH87-like
SwissprotQ8S3D25e-90BH087_ARATH; Transcription factor bHLH87
TrEMBLF6HY460.0F6HY46_VITVI; Putative uncharacterized protein
STRINGVIT_09s0002g02700.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.13e-75bHLH family protein